Networks of Protein Interfaces
What are you getting?
How to use it?
Make sure that the latest version of CyToStruct plug-in is installed in Cytoscape.
Produce an archive file for a PDB (e.g., 3J7Y).
Download the zip file and extract its contents.
Open the session
.cys
file in Cytoscape.
Right-click on a node or an edge and look for 'CyToStruct' menu
Note: the session file is predefined to work with four popular molecular viewers - PyMol, Jmol, VMD, UCSF Chimera.
The default configuration file assumes that the working directory of the viewer is part of the user
PATH
.
If it is not the case, CyToStruct will fail when executing the viewer.
For detailed instructions of introducing the viewers to CyToStruct
read here
.
